2016 |
|
| Particle-based multiscale modeling of calcium puff dynamics U Dobramysl, S Rüdiger, R Erban SIAM J Multiscale Modeling and Simulation 14, 997-1016 |
|
| Calcium waves in a grid of clustered channels with
synchronous IP3 binding and unbinding M Rückl, S Rüdiger to appear in EPJ-E |
|
2015 |
|
| Modulation
of Elementary Calcium Release Mediates a Transition from Puffs
to Waves in an IP3R Cluster Model M Rückl, I Parker, JS Marchant, C Nagaiah, FW Johenning, S Rüdiger PLoS Computational Biology 11, e1003965 |
|
| Accurate Langevin approaches to simulate Markovian channel
dynamics Y Huang, S Rüdiger, J Shuai Physical Biology 12 (6), 061001 |
|
| Ryanodine receptor activation induces long-term plasticity of
spine calcium dynamics FW Johenning, AK Theis, U Pannasch, M Rückl, S Rüdiger, D Schmitz PLoS Biol 13 (6), e1002181 |
|
| Degree correlations optimize neuronal
network sensitivity to sub-threshold stimuli C Schmeltzer, AH Kihara, IM Sokolov, S Rüdiger PloS one 10 (6), e0121794 |
|
2014 |
|
| Functional
regulation of neuronal nitric oxide synthase expression and
activity in the rat retina LT Walter, GSV Higa, C Schmeltzer, E Sousa, ER Kinjo, S Rüdiger, Dânia Emi Hamassaki, Giselle Cerchiaro, Alexandre Hiroaki Kihara Experimental Neurology 261, 510-517 |
|
| Excitability
in a stochastic differential equation model for calcium puffs S Rüdiger Physical Review E 89, 062717 |
|
| Percolation
of spatially constrained Erdős-Rényi networks with degree
correlations C Schmeltzer, J Soriano, IM Sokolov, S Rüdiger Physical Review E 89, 012116 |
|
| Frequency
and Relative Prevalence of Calcium Blips and Puffs in a Model of
Small IP3R Clusters H.
Qi,
Y. Huang,
S.
Rüdiger,
J. Shuai |
|
| Stochastic models
of intracellular calcium signals S. Rüdiger Physics Reports, 534, 39 |
|
| A k-population model to calculate the firing rate of neuronal
networks with degree correlations C Schmeltzer, A Kihara, I Sokolov, S Rüdiger BMC Neuroscience 15 (Suppl 1), O14 |
|
2013 |
|
| Diffusive
spatio-temporal noise increases IP3R calcium channel puff
frequency M. Flegg, S. Rüdiger, R. Erban J. Chem. Phys. 138, 154103 |
|
| Langevin approach for stochastic Hodgkin-Huxley dynamics
with discretization of channel open fraction Y. Huang, S. Rüdiger, J. Shuai Physics Letters A 377, 3223 |
|
| Channel-based Langevin approach for the stochastic
Hodgkin-Huxley neuron Y. Huang, S. Rüdiger, J.W. Shuai PRE 87, 012716 |
|
2012 |
|
| Whole-cell simulations of hybrid stochastic and deterministic
calcium dynamics in 3D geometry Ch. Nagaiah, S. Rüdiger J. of Comp. Interdisciplinary Sciences 3, 3 |
|
| Synchronization in networks of excitable elements with
time-delayed and rectifying coupling S. Rüdiger, R. Möbius, L. Schimansky-Geier to appear in NOLTA 2012 |
|
| Adaptive space and time
numerical simulation of reaction-diffusion models for
intracellular calcium dynamics C. Nagaiah, G. Warnecke, S. Rüdiger, M. Falcke Appl. Math. Comp. 218, 10194 |
|
| Termination of Ca2+ release for
clustered IP3R channels S. Rüdiger, P. Jung, J.W. Shuai PLoS Comput Biol 8(5): e1002485. doi:10.1371/journal.pcbi.1002485 (The Faculty of 1000 evaluated this article as "Must-Read") |
|
2011 |
|
| Modified Langevin approach for a
stochastic calcium puff model Y. Huang, S. Rüdiger, J.W. Shuai Eur. Phys. J. B 83, 401 |
|
| Pulses and the transition to a
stationary regime in an array of excitable
elements with time-delayed coupling O. Valles, R. Möbius, S. Rüdiger, L. Schimansky-Geier Phys. Rev. E 83, 036209 |
|
| Coherent
calcium puff signals driven by intracellular noises R. Sheng, S. Rüdiger, J.W. Shuai Physica A 390, 1117 |
|
2010 |
|
| Puff-wave transition in an
inhomogeneous model for calcium signals J.W. Shuai, Y.D. Huang, S. Rüdiger Phys. Rev. E. 81, 041904 |
|
| Law
of Mass Action, Detailed Balance, and the Modeling of Calcium
Puffs S. Rüdiger, J.W. Shuai, I.M. Sokolov Phys. Rev. Lett. 105, 048103 (The Faculty of 1000 evaluated this article as "Must-Read") |
|
|
Calcium Domains around Single and
Clustered IP3 Receptors and Their Modulation by Buffers
S. Rüdiger, C. Nagaiah, G. Warnecke, J.W. Shuai Biophys. J. 99, 3 |
|
2009 |
|
| An investigation of models of
the IP3R channel in Xenopus oocyte J.W. Shuai, D.P. Yang, J.E. Pearson, S. Rüdiger Chaos 19, 037105 |
|
| Modeling
of the modulation by buffers of Ca2+ release through clusters of
IP3 receptors S. Zeller, S. Rüdiger, H. Engel, J. Sneyd, G. Warnecke, I. Parker, M. Falcke Biophys. J. 97, 992-1002 |
|
| Dynamics of excitable elements
with time-delayed coupling S. Rüdiger, L. Schimansky-Geier J. Theor. Biol. 259, 96-100 |
|
| Mechano-genetic
coupling of Hydra symmetry breaking and driven Turing instability
model J. Soriano, S. Rüdiger, P. Pullarkat, A. Ott Biophys. J. 96, 1649-1660 |
|
2008 |
|
| Adaptive
numerical
simulation of intracellular calcium dynamics using domain
decomposition methods C. Nagaiah, S. Rüdiger, G. Warnecke, M. Falcke Appl. Num. Math. 58, 1658-1674 |
|
| Parallel
numerical
solution of intracellular calcium dynamics C. Nagaiah, S. Rüdiger, G. Warnecke, M. Falcke Lect. Notes Comp. Sc. Eng. 60, 607-614 |
|
2007 |
|
| Theory
of
pattern-forming systems under travelling-wave forcing S. Rüdiger, E. Nicola, J. Casademunt, L. Kramer Phys. Rep. 447, 73-111 |
|
| Hybrid
stochastic and deterministic simulations of calcium blips S. Rüdiger, J.W. Shuai, W. Huisinga, C. Nagaiah, G. Warnecke, I. Parker, M. Falcke Biophys. J. 93, 1847-1857 |
|
| Dynamics
of
domain walls in pattern formation with traveling wave
forcing S. Rüdiger, J. Casademunt, L. Kramer Phys. Rev. Lett. 99, 028302 |
|
| 2005 |
|
| Bifurcations
and chaos in single-roll natural convection with low
Prandtl number I. Mercader, X. Ruiz, O. Batiste, S. Rüdiger, L. Ramirez-Piscina, J. Casademunt, Phys. Fluids 17, 104108 (2005) |
|
| Kinks
in stripe forming systems under travelling wave forcing S. Rüdiger, J. Casademunt, L. Kramer Discr. Cont. Dyn. Sys. B 5 (2005) 1027-1042 |
|
| Viscoelastic
response
of diblock copolymers to oscillatory shear S. Rüdiger Eur. Phys. J. E 17 (2005) 45 |
|
2004 |
|
| Model
equations
for weakly damped Faraday waves S. Rüdiger, J.M. Vega in: Lecture notes on Dynamics and Bifurcation of Patterns in Dissipative Systems, G. Dangelmayr, I. Oprea (editors), World Scientific Series on Nonlinear Sciences, Series B, World Scientific, 2004 |
|
| A
phenomenological model of weakly damped Faraday waves and
the associated mean flow J.M. Vega, S. Rüdiger, J. Vinals Phys. Rev. E 70 (2004), 046306 |
|
| 2003 |
|
| Mode
interaction in rotating Rayleigh-Benard convection S. Rüdiger, E. Knobloch Fluid Dynamics Research 33 (2003), 477 |
|
| Dynamo
effect in a driven helical flow F. Feudel, M. Gellert, S. Rüdiger, A. Witt, N. Seehafer Phys. Rev. E 68 (2003), 046302 |
|
| Dynamics
of Turing patterns under spatio-temporal forcing S. Rüdiger, D. Gomez-Miguez, A.P. Munuzuri, F. Sagues, J. Casademunt Phys. Rev. Lett. 90 (2003), 128301 |
|
| 2001 |
|
| Chaotic
response of small Prandtl number fluids to low gravity in
differentially heated cavities X. Ruiz, S. Rüdiger, L. Ramirez-Piscina, J. Casademunt Proceedings of IAF'2001: 52nd International Astronautical Congress, Toulouse, France |
|
| 2000 |
|
| Pattern
formation
in Rayleigh-Benard convection in a cylindrical container
S. Rüdiger, F. Feudel Phys. Rev. E 62 (2000), 4927 |
|
| Bifurcation
phenomena
and dynamo effect in electrically conducting fluids F. Feudel, S. Rüdiger, N. Seehafer Ergodic Theory, Analysis, and Efficient Simulation of Dynamical Systems, B. Fiedler (editor), 2000 |
|
| Lagrangian
chaos and dynamo effect in magnetohydrodynamics F. Feudel, S. Rüdiger, A. Witt, M. Gellert EQUADIFF99, International Conference on Differential Equations Berlin 1999, B. Fiedler, K. Groeger, J. Sprekels (editors), Vol. 2, 1275-1277, World Scientific 2000 |
|
| 1998 |
|
| Dynamo
bifurcations
in an array of driven convection-like rolls S. Rüdiger, F. Feudel, N. Seehafer Phys. Rev. E 57 (1998), 5533 |
|
|
1996 |
|
| Symmetry
breaking
bifurcations for the magnetohydrodynamic equations. F. Feudel, N. Seehafer, B. Galanti, S. Rüdiger Phys. Rev. E 54 (1996), 2589 |